[cellml-discussion] curation status of models in the repository
David Nickerson
david.nickerson at nus.edu.sg
Wed Jun 20 17:45:37 NZST 2007
Hi all,
I am just after a bit of clarification on the use of the stars with the
models in the model repository. As I understand the model curation (from
http://www.cellml.org/repository-info/info), one star means the model is
at curation level 1, two stars for level 2, and three for level 3
curation. For the model simulation tools, there is one star if the model
loads in and runs, 2 if the model gives the right results, and 3 stars
if the results have been rigorously verified.
The first question I have is if the stars next to the "Standard" link
represent the model curation level while those next to specific tools
correspond to the running of simulations of that model with that tool?
In other words, it is not very obvious what all the stars are implying
when looking at a model's page in the repository.
Looking at the models with two stars (thanks to Tommy's new filter tool
on the main page), I see they generally have two stars for Standard,
PCEnv and COR but no stars for JSim. If the "Standard" stars do reflect
the curation level of the model, then my second question is how are the
units are being checked (as required for level 2 curation) without using
JSim? I was under the impression that JSim was the only tool capable of
throughly checking all the units for consistency in a model, but perhaps
there is something else? And if so, should it not also be displayed
along with PCEnv, COR, and JSim?
Thanks,
David.
--
David Nickerson, PhD
Research Fellow
Division of Bioengineering
Faculty of Engineering
National University of Singapore
Email: david.nickerson at nus.edu.sg
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