[cellml-discussion] Concerning the CellML Model Repository

[Matt]

I think BioModels had every intention of harbouring CellML models too
if we were interested. I'm sure they are listening :-)



On 6/22/07, David Nickerson <david.nickerson at nus.edu.sg> wrote:
> It might also be worth looking into what the folks over at
> http://www.biomodels.net/ are up to. Given they seem to have curation
> built into their repository and maybe some other features worth looking
> into?
>
> And if we're going to be starting from scratch, there might be some
> value into seeing how the biomodels repository could be extended to
> support CellML?
>
> When you start seeing comments like "BioModels Database ranked first
> data resource for Systems Biology" in Nature Biotechnology, it might be
> a hint that they're doing something right and we should maybe be working
> with them rather than independently.
>
>
> David.
>
>
> Tommy Yu wrote:
> > Hi,
> >
> > I have written down some of my thoughts on how the model repository could be put together.
> >
> > http://www.cellml.org/Members/tommy/repository_redesign.html
> >
> > It is still a pretty rough document.  The usage example section gives a rough outline on what I see people might be doing with the repository and how this design could address those issues, which I think it will be of interest to users.  It is not an exhaustive list, yet.
> >
> > I must also note the design outlined is quite a drastic departure from what we have now (it will be yet another new repository).  However, it is more true to the one envisioned before according to http://www.cellml.org/wiki/CellMLModelRepositories, except I have an addition layer that will assist in pulling content and drawing relationships between models.
> >
> > Feel free to take it apart and/or build on top of it.
> >
> > Cheers,
> > Tommy.
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>
> --
> David Nickerson, PhD
> Research Fellow
> Division of Bioengineering
> Faculty of Engineering
> National University of Singapore
> Email: david.nickerson at nus.edu.sg
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