[cellml-discussion] installation of CellML DOM API: Core implementation for all platforms

Andrew Miller ak.miller at auckland.ac.nz
Wed Oct 8 09:58:08 NZDT 2008


song zhen wrote:
> Hi Alan,
> I have read those documentations, but I am not familiar with this kind 
> stuff, and the problem is that I don't really know what kind of the 
> Linux systems I am using. Here is the information for my iMac: Mac OS 
> X Version 10.4.11 (Tiger),  Fink installed. Could you tell me which 
> documentation in the website you attached is useful for me?
>
> And another question is that is CellML DOM API  enough to open and use 
> the model file that I downloaded from CellML? Thanks!!
Hi Song,

The CellML DOM API is a programmatic interface, and is the thing to use 
if you want to write a program for processing CellML models. If you are 
looking for a program with a graphical user interface which can be used 
to edit CellML models and run simulations etc..., try PCEnv, which makes 
use of the CellML API but exposes it through a user interface.

Although PCEnv builds on Mac OS X, there are a number of usability 
issues at present, so I would recommend downloading a Linux snapshot and 
running the Linux version in a virtual machine. We are looking to 
improve OS X support in future.

Best wishes,
Andrew

>
> Best,
>
> Song
>
> On Mon, Oct 6, 2008 at 4:17 PM, Alan Garny <alan.garny at dpag.ox.ac.uk 
> <mailto:alan.garny at dpag.ox.ac.uk>> wrote:
>
>     Dear Song,
>
>      
>
>     Did you have a look at the installation documentation?
>     https://svn.physiomeproject.org/svn/physiome/CellML_DOM_API/trunk/docs/
>
>      
>
>     Hopefully, you use one of the Linux systems for which we have some
>     documentation.
>
>      
>
>     Regards, Alan
>
>      
>
>     *From:* cellml-discussion-bounces at cellml.org
>     <mailto:cellml-discussion-bounces at cellml.org>
>     [mailto:cellml-discussion-bounces at cellml.org
>     <mailto:cellml-discussion-bounces at cellml.org>] *On Behalf Of *song
>     zhen
>     *Sent:* 06 October 2008 20:58
>     *To:* cellml-discussion at cellml.org
>     <mailto:cellml-discussion at cellml.org>
>     *Subject:* [cellml-discussion] installation of CellML DOM API:
>     Core implementation for all platforms
>
>      
>
>     Hi,
>     I have a trouble in installation of this source file. when I ran
>     "./configure" command in x11, there was an error message stating
>     that "configure: error: GSL CBLAS library required". And actually,
>     I have updated fink and also installed the "gsl" package already.
>     What else should I do to fix this error?
>
>     Thanks in advance!
>
>     Song
>
>
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>
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