[cellml-discussion] CellML OWL work in progress

[Sarala Dissanayake]

Hi Randy and Ely,

I'm developing a framework for annotating and visualizing CellML  
models. A solution has been developed that involves:
- an ontology for storing CellML models in OWL format (CellMLOWL) and  
a set of rules for binding these CellMLOWL instances to CellML models.
- an ontology which represents biophysical and biological concepts  
that are covered in CellML models (CellMLBio) and a set of rules for  
binding these concepts to CellMLOWL models;
- a specification for building visual templates that support a visual  
language that can be used to represent all biophysical and biological  
processes covered in CellMLBio ontology and the rules for binding the  
visual language to concepts within the CellMLBio ontology;
- a visual editing tool, that combines the visual language and  
ontologies to visualize CellML models.

I'm currently writing up my thesis and 3 papers. I should be able to  
make these available to you in draft form soon.

Cheers,
Sarala

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