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Message-ID: <47434120.3070105@auckland.ac.nz>
Date: Wed, 21 Nov 2007 09:18:40 +1300
From: Gareth de Walters <g.dewalters@auckland.ac.nz>
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To: Tommy Yu <tommy.yu@auckland.ac.nz>
CC: James Lawson <j.lawson@auckland.ac.nz>, 
	Catherine Lloyd <c.lloyd@auckland.ac.nz>,
	Randall Britten <r.britten@auckland.ac.nz>
Subject: Re: application 'ML'
References: <4742D3EC.7000100@sjc.ox.ac.uk>
In-Reply-To: <4742D3EC.7000100@sjc.ox.ac.uk>
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Hi everyone,

this from Steven in Oxford, via the CellML Webmaster account. Please let 
me know if there is a more appropriate contact I can forward this mail to.

thanks, Gareth


Steven Niederer wrote:
> Hi guys,
>
> Just checking if there was any work been done on the following:
>
> 1) creating maps of variable names to allow a user (me) to define a 
> variable that I want to change in a one file and have that mapped onto 
> the corresponding variable in a model. (I am batch processing analysis 
> of 20+ models at the moment)
>
> ie I wish to set value for  intracellular calcium. I want to call the 
> variable Cai but in the models that I have it is called cai, Cai  and 
> Ca_i etc. so I wish to create a wrapper for each model to map the 
> variables to a standard name.
> Is there any work been done on things like this and if so is their a 
> recommended format for the mapping wrapper?
>
> 2) Defining virtual experiment protocols.
>
> After defining the model variables that I wish to set as model outputs 
> or inputs I would like to define how the input variables are set and 
> if I want any post processing to be done on my output signals.
> Again I wondered if there was a proposed format for these types of 
> descriptions.
>
>
> Any suggestions would be great.
>
> cheers
>
> Steven Niederer
>


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fn:Gareth de Walters
n:de Walters;Gareth
org:University of Auckland;Auckland Bioengineering Institute
adr:Auckland;;Level 6, 70 Symonds St;;;;New Zealand
title:Webmaster and Database Administrator
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