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Hi all,

The Computational Modeling in Biology Network (COMBINE) is an initiative to
coordinate the development of the various community standards and formats
in systems biology, synthetic biology and related fields. HARMONY is a
codefest-type meeting, with a focus on development of the standards,
interoperability and infrastructure. There are generally not many general
discussions or oral presentations during HARMONY; instead, the time is
devoted to allowing hands-on hacking and interaction between people focused
on practical development of software and standards.

HARMONY 2021 will be an online only meeting similar to COMBINE 2020 (
https://protect-au.mimecast.com/s/gFHHCD1vOJH5LP11hWGoAK?domain=co.mbine.org.
Most of the day will be scheduled
by the communities as breakouts. In addition, we will have some time each
day for community discussion and wrap-ups of breakouts and advertisements
for following breakouts.

Full details can be found at:
https://protect-au.mimecast.com/s/3bFBCE8wg6H38PmmIwOfjw?domain=co.mbine.org

IMPORTANT DATES

---------------

Breakout submission deadline: 23rd Feb 2021

Lightning talk submission deadline: 23rd Feb
2021

Notification of acceptance of breakouts: 1st March 2021

HARMONY Workshop:
22-26th March 2021

REGISTRATION

------------------

Registration for the meeting is open and is free. Please register at the
link below as soon as possible. This will help us plan the schedule and
match your interests to the timing of the breakouts, etc. Note: only
registered attendees will be sent information related to video conferencing
links, etc.

Registration:
https://protect-au.mimecast.com/s/XKwVCGv0kQt1NgmmcpNrqx?domain=forms.gle

CALL FOR BREAKOUT SESSIONS

------------------

All attendees can suggest breakout sessions for hacking and/or detailed
discussions of certain aspects of one or several of the COMBINE
standard(s), metadata and semantic annotations (format-specific or
overarching), application and implementations of the COMBINE standards, or
any other topic relevant for the COMBINE community. The topics for those
breakout sessions, and the time slots which would suit their communities
can be submitted at the link below.

Note: breakout session organisers will be responsible for creating and
hosting their own online sessions.

Breakout proposals:
https://protect-au.mimecast.com/s/jUSrCJyBn7IqWXRRsLgIB2?domain=forms.gle

CALL FOR LIGHTNING TALKS

------------------

Requests for a lightning talk (3 min max.) can be submitted via the form
below. Please use several forms if you want to submit abstracts on
different topics. The submission deadline is outlined above. Talks will
take place during the community session.

Lightning talk submission:
https://protect-au.mimecast.com/s/eAY7CK1Do5H2yJllupdQtF?domain=forms.gle



TOPICS OF INTEREST

------------------

Topics of interest for the meeting include, but are not limited to:

- Data exchange, pipelines and model standards for systems and synthetic
biology

- Visualization and graphical notation standards for systems and synthetic
biology

- Standards for sharing and analysing biological pathway data

- Standards for computational biological models and modelling support

- Metadata description and model annotation in COMBINE standard formats

- Implementation of COMBINE standards in tools, databases and other
resources

- Integrated model and data management for systems and synthetic biology

- Standardization of Artificial Intelligence approaches in biological
modelling

- Emerging standardization needs and multicellular modeling

- Community aspects of COMBINE

More on the COMBINE standards at
https://protect-au.mimecast.com/s/oy44CL7Ep5FRDvAAHgGtLE?domain=co.mbine.org

Best regards,

The COMBINE Coordinators

Gary Bader, University of Toronto, Canada

Padraig Gleeson, University College London, UK

Martin Golebiewski, Heidelberg Institute for Theoretical Studies (HITS),
Germany

Thomas Gorochowski, University of Bristol, UK

Sarah Keating, University College London, UK

Matthias König, Humboldt University Berlin, Germany

Chris J. Myers, University of Colorado Boulder, USA

David Nickerson, University of Auckland, New Zealand

Falk Schreiber, University of Konstanz, Germany

Dagmar Waltemath, University Medicine Greifswald, Germany

https://protect-au.mimecast.com/s/0IWFCMwGq5hqylggsG79dG?domain=co.mbine.org

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• [cellml-discussion] HARMONY 2021 - registration open and call for breakouts and lightning talks, David Nickerson, 01/28/2021

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