Chronological Thread 

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Hi all,
I am trying to create the repressilator in CellML as part of a project via
the python binding.
Unfortunately, the created models (cellml v2.0) are not rendered in
OpenCOR. I.e. normally I see nice CellML Text in the editor, but for the
attached model nothing is displayed.

```

<?xml version="1.0" encoding="UTF-8"?>
<model
xmlns="https://protect-au.mimecast.com/s/fTM8CVARD0T944z2iG5XgB?domain=cellml.org";
name="repressilator">
<component name="parameters">
<variable name="n" units="dimensionless" initial_value="2"/>
</component>
</model>

```
Model was created using libcellml via

```

import libcellml
from cellml_utilities import print_model


def create_model(cellml_path: Path) -> libcellml.Model:
"""Create CellML repressilator and save to Path."""
model = libcellml.Model()
model.setName("repressilator")

comp_parameters = libcellml.Component()
comp_parameters.setName("parameters")
model.addComponent(comp_parameters)

# var n: dimensionless {init: 2, pub: out};
var_n = libcellml.Variable()
var_n.setName("n")
var_n.setInitialValue(2.0)
var_n.setUnits("dimensionless")
# var_n.setInterfaceType()
comp_parameters.addVariable(var_n)

# Checking that it worked
print_model(model)

# Save model
printer = libcellml.Printer()
serialised_model: str = printer.printModel(model)

with open(cellml_path, "w") as f_cellml:
f_cellml.write(serialised_model)

return model

```

How can I create models with python libcellml which I can use/edit/view in
OpenCOR?
Best Matthias

--
Matthias König, PhD.
Junior Group Leader Systems Medicine of the Liver Lab
Humboldt-Universität zu Berlin,
Institute of Biology, Institute for Theoretical Biology
Philippstraße 13, Haus 20, 10115 Berlin
Tel: +49 30 2093 98435
https://protect-au.mimecast.com/s/SahXCWLVEjtGppN6txhtfs?domain=livermetabolism.com
konigmatt AT googlemail.com
https://protect-au.mimecast.com/s/AZKpCXLWGkt066k4UD580u?domain=twitter.com
https://protect-au.mimecast.com/s/rwcKCYW8JlTO00jDtVBtC-?domain=github.com

Attachment: repressilator.cellml
Description: Binary data

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• [cellml-discussion] CellML model not rendered in OpenCOR, Matthias König, 07/06/2022
  • Re: [cellml-discussion] CellML model not rendered in OpenCOR, Alan Garny, 07/06/2022
    • Re: [cellml-discussion] CellML model not rendered in OpenCOR, Lucian Smith, 07/06/2022
      • Re: [cellml-discussion] CellML model not rendered in OpenCOR, Alan Garny, 07/06/2022
        • Re: [cellml-discussion] CellML model not rendered in OpenCOR, Matthias König, 07/06/2022
          • Re: [cellml-discussion] CellML model not rendered in OpenCOR, Michael Clerx, 07/06/2022
            • Re: [cellml-discussion] CellML model not rendered in OpenCOR, Matthias König, 07/07/2022
              • Re: [cellml-discussion] CellML model not rendered in OpenCOR, Alan Garny, 07/07/2022

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