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[cellml-discussion] Suggestions regarding search and browse utility for CellML Repository


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  • From: m.cooling at auckland.ac.nz (Michael Cooling)
  • Subject: [cellml-discussion] Suggestions regarding search and browse utility for CellML Repository
  • Date: Thu, 24 Apr 2008 02:17:10 +1200
My investigations in the UK have led me to conclude that especially
number 3 below, and the support for stochastic models which Andrew has
just emailed about, are both on various groups' wish lists, and would
significantly enhance CelLML's utility.

Mike

Quoting Abhishek Tiwari <a.tiwari at auckland.ac.nz>:

> As growing no of models in CellML repository I feel that CellML
> Repository can be made more user friendly by implementing one or more
> suggestions mentioned below-
> 1. A Tree like browsing mechanism in which end child node of tree will
> have model. For that we need to have classification system for the
> models based on Physiological system or better say using MeSH (Medical
> Subject Headings,something like
> http://www.nlm.nih.gov/cgi/mesh/2008/MB_cgi). Models can be in multiple
> classes and basically model metadata can have details for the
> classification purpose like keywords. Domain ontologies can be used to
> give better description for tree like representation.
> 2. For a given model at the end of overview similar models (basic or
> improved models or more complex models) can be reported (Similar to
> model variants).
> 3. Web services to search and download CellMl models for non ABI tools (
> using CellMl API or Web API for CellMl).
>
> I don't know if efforts to handle above is under development or already
> exists so I thought to write you all.
>
> abhishek
>
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>





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