- From: ely.matos at ufjf.edu.br (Ely Edison Matos)
- Subject: [cellml-discussion] OWL
- Date: Thu, 28 Aug 2008 22:10:00 -0300
Hello,
Randy and James, just to join to discussion, I would like to remember a
message from me at May,18, introducing CelO, a ontology to work with CellML
using a SOA approch.
If you want, Randy, I can send the draft to you.
It would be very useful if Sara could show the main ideas about CellML-OWL
too (as PhD thesis, maybe it is impossible, but ...:-)))
Thanks,
Ely Matos
----- Original Message -----
From: "James Lawson" <j.lawson at auckland.ac.nz>
To: "CellML Discussion List" <cellml-discussion at cellml.org>
Sent: Sunday, August 24, 2008 8:54 PM
Subject: Re: [cellml-discussion] OWL
>
Dear Randy,
>
>
Thanks for asking. Unfortunately that roadmap is somewhat embarrassing
>
for us. We are currently undertaking a major reworking of the website,
>
and once we finish setting out our plans, the roadmap is right at the
>
top of my list of pages to rewrite. In the meantime, let me see if I can
>
explain what we're up to with respect to OWL and ontologies.
>
Unfortunately, the CellML team member who was primarily responsible for
>
this project, and whose commentary you can find under the wiki section
>
of the site on ontologies, is no longer with us. I have begun to take up
>
the rope on this, but I am still really working on upskilling myself.
>
>
Sarala Dissanayake is working on writing up her PhD thesis, in which she
>
presents her work on developing CellML-OWL. CellML-OWL aims to provide
>
infrastructure for ontologies that can be used for annotation of models
>
with biological and biophysical information. Sarala has developed a tool
>
for visualisation of CellML models using CellML-OWL as well.
>
>
I'd direct you to Sarala (sarala.dissanayake at auckland.ac.nz) for more
>
information on our current development in OWL and ontologies.
>
>
Kind regards,
>
James Lawson
>
>
Randy Heiland wrote:
>
> As I continue to try to educate myself on CellML, I thought I'd ask
>
> the open-ended question - what are the latest thoughts/plans for OWL?
>
> I saw the web page: http://www.cellml.org/cellml_roadmap, but noticed
>
> that it was about 4 yrs old, so thought I'd ask the list.
>
>
>
> thanks, Randy
>
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>
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>
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>
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