- From: mneal at u.washington.edu (Maxwell Neal)
- Subject: [cellml-discussion] cellml-discussion Digest, Vol 85, Issue 2
- Date: Tue, 2 Aug 2011 17:05:21 -0700
Thanks for the info, Tommy!
M
---------------------------------
Maxwell Neal
Post-doctoral researcher
University of Washington
mneal at uw.edu
(206) 543-8769
---------------------------------
On Aug 2, 2011, at 5:00 PM, cellml-discussion-request at cellml.org wrote:
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Today's Topics:
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1. Re: cellml-discussion Digest, Vol 84, Issue 10 (Tommy Yu)
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>
>
----------------------------------------------------------------------
>
>
Message: 1
>
Date: Tue, 02 Aug 2011 16:02:28 +1200
>
From: Tommy Yu <tommy.yu at auckland.ac.nz>
>
Subject: Re: [cellml-discussion] cellml-discussion Digest, Vol 84,
>
Issue 10
>
To: CellML Discussion List <cellml-discussion at cellml.org>
>
Message-ID: <4E3776D4.2070101 at auckland.ac.nz>
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Content-Type: text/plain; charset=ISO-8859-1; format=flowed
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>
Maxwell Neal wrote:
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> Hi all - I was wondering - is there a webservice that would allow me
>
> to programmatically download all the cellml models in the cellml
>
> repository? Many thank,
>
>
>
>
Hi Maxwell,
>
>
Thank you for your interest in the CellML Model Repository. While we
>
currently don't have a formalized web service, we do provide a list of IDs
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to the workspaces (http://models.cellml.org/workspace) which can be found
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at http://models.cellml.org/workspace/list_txt. Basically you can append
>
the ids listed with the path.
>
>
To acquire the models, we recommend the usage of a Mercurial client, which
>
can be acquired from http://mercurial.selenic.com/. You can then use some
>
kind of shell scripting to loop through that list and clone each workspace
>
onto your local machine.
>
>
This is an example shell script:
>
>
#!/bin/sh
>
>
WS_ROOT=https://models.cellml.org/workspace
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LIST=list_txt
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for WORKSPACE in `wget --no-check-certificate -q -O - $WS_ROOT/$LIST`; do
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if [ -d $WORKSPACE ]; then
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echo $WORKSPACE exists. Checking updates.
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hg pull -R $WORKSPACE
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hg up -R $WORKSPACE -C
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else
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echo $WORKSPACE does not exist. Cloning.
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hg clone $WS_ROOT/$WORKSPACE
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fi
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done
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>
Note this script will overwrite any local uncommitted changes.
>
>
Regards,
>
Tommy.
>
>
> M
>
>
>
> --------------------------------- Maxwell Neal
>
>
>
> Post-doctoral researcher University of Washington mneal at uw.edu (206)
>
> 543-8769 ---------------------------------
>
>
>
>
>
>
>
>
>
> On Jul 29, 2011, at 5:00 PM, cellml-discussion-request at cellml.org
>
> wrote:
>
>
>
>> Send cellml-discussion mailing list submissions to
>
>> cellml-discussion at cellml.org
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>>
>
>> To subscribe or unsubscribe via the World Wide Web, visit
>
>> http://lists.cellml.org/mailman/listinfo/cellml-discussion or, via
>
>> email, send a message with subject or body 'help' to
>
>> cellml-discussion-request at cellml.org
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>>
>
>> You can reach the person managing the list at
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>> cellml-discussion-owner at cellml.org
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>>
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>> When replying, please edit your Subject line so it is more specific
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>> than "Re: Contents of cellml-discussion digest..."
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>>
>
>>
>
>> Today's Topics:
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>>
>
>> 1. ABI CellML Meeting Minutes, 27th July, 2011 (Dougal Cowan)
>
>>
>
>>
>
>> ----------------------------------------------------------------------
>
>>
>
>>
>
>> Message: 1 Date: Fri, 29 Jul 2011 13:56:13 +1200 From: Dougal Cowan
>
>> <dj.cowan at auckland.ac.nz> Subject: [cellml-discussion] ABI CellML
>
>> Meeting Minutes, 27th July, 2011 To: CellML Discussion List
>
>> <cellml-discussion at cellml.org> Message-ID:
>
>> <4E32133D.4080007 at auckland.ac.nz> Content-Type: text/plain;
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>> charset=ISO-8859-1; format=flowed
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>>
>
>> I have put the minutes from this week's meeting up at:
>
>>
>
>> http://www.cellml.org/community/meeting/minutes/2011/07.27
>
>>
>
>> Cheers, Dougal
>
>>
>
>>
>
>>
>
>> ------------------------------
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>>
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>>
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>> End of cellml-discussion Digest, Vol 84, Issue 10
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>> *************************************************
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End of cellml-discussion Digest, Vol 85, Issue 2
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- [cellml-discussion] cellml-discussion Digest, Vol 85, Issue 2, Maxwell Neal, 08/03/2011
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