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Maxwell Neal wrote:
> Hi all - I was wondering - is there a webservice that would allow me
> to programmatically download all the cellml models in the cellml
> repository? Many thank,
>

Hi Maxwell,

Thank you for your interest in the CellML Model Repository. While we
currently don't have a formalized web service, we do provide a list of IDs to
the workspaces (http://models.cellml.org/workspace) which can be found at
http://models.cellml.org/workspace/list_txt. Basically you can append the
ids listed with the path.

To acquire the models, we recommend the usage of a Mercurial client, which
can be acquired from http://mercurial.selenic.com/. You can then use some
kind of shell scripting to loop through that list and clone each workspace
onto your local machine.

This is an example shell script:

#!/bin/sh

WS_ROOT=https://models.cellml.org/workspace
LIST=list_txt
for WORKSPACE in `wget --no-check-certificate -q -O - $WS_ROOT/$LIST`; do
if [ -d $WORKSPACE ]; then
echo $WORKSPACE exists. Checking updates.
hg pull -R $WORKSPACE
hg up -R $WORKSPACE -C
else
echo $WORKSPACE does not exist. Cloning.
hg clone $WS_ROOT/$WORKSPACE
fi
done

Note this script will overwrite any local uncommitted changes.

Regards,
Tommy.

> M
>
> --------------------------------- Maxwell Neal
>
> Post-doctoral researcher University of Washington mneal at uw.edu (206)
> 543-8769 ---------------------------------
>
>
>
>
> On Jul 29, 2011, at 5:00 PM, cellml-discussion-request at cellml.org
> wrote:
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>> Today's Topics:
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>> 1. ABI CellML Meeting Minutes, 27th July, 2011 (Dougal Cowan)
>>
>>
>> ----------------------------------------------------------------------
>>
>>
>> Message: 1 Date: Fri, 29 Jul 2011 13:56:13 +1200 From: Dougal Cowan
>> <dj.cowan at auckland.ac.nz> Subject: [cellml-discussion] ABI CellML
>> Meeting Minutes, 27th July, 2011 To: CellML Discussion List
>> <cellml-discussion at cellml.org> Message-ID:
>> <4E32133D.4080007 at auckland.ac.nz> Content-Type: text/plain;
>> charset=ISO-8859-1; format=flowed
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>> I have put the minutes from this week's meeting up at:
>>
>> http://www.cellml.org/community/meeting/minutes/2011/07.27
>>
>> Cheers, Dougal
>>
>>
>>
>> ------------------------------
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>> End of cellml-discussion Digest, Vol 84, Issue 10
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• [cellml-discussion] cellml-discussion Digest, Vol 84, Issue 10, Tommy Yu, 08/02/2011

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