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Tommy Yu
Tommy Yu
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[cellml-discussion] Staging of Physiome Repository with git backend; PMR2 release10 testing
Chronological Thread
- From: Tommy Yu <tommy.yu AT auckland.ac.nz>
- To: CellML Discussion Group <cellml-discussion AT cellml.org>
- Subject: [cellml-discussion] Staging of Physiome Repository with git backend; PMR2 release10 testing
- Date: Fri, 27 Feb 2015 17:16:05 +1300
Greetings,
The staging instance of the Physiome Repository (with PMR2 release 10) is now
completed. Final packages have not been built yet; they will be done a week
from now for a further week of testing before deployment. An issue with
migration for exposures have been corrected - all exposures should now map
correctly to the corresponding changeset for all exposures now.
Staging instance of the Physiome Repository can be found at:
http://staging.physiomeproject.org/
End-user documentation in the post-git migration is completed and can be
found at:
http://aucklandphysiomerepository.readthedocs.org/en/gitmigration/index.html
Major new features for this release includes:
- Standardization of web-services access of PMR2 by the usage of
Collection+JSON for all web-service endpoints. The mime-type version has
been incremented to not interfere with existing clients on previous protocol.
- COMBINE archive generation fully integrated.
- Email notification for curators
Physiome Repository specific changes:
- Enable use of git, disabled of the use of Mercurial (not deployed on
staging yet, this is done when a final profile is released for testing in
about a week).
Other features have been deferred due to a major shift in priority - those
are now deferred to the next release.
Known issues:
- Inline input verification for forms is broken (warning will come up about
missing data even if the input field on a form is already filled out). I
will be investigating this in the coming week.
- All indexed metadata on production is not automatically indexed on staging,
i.e. search results with the ricordo search will seem rather barren - this
will not be a problem on production as the rdf store was not migrated due to
the amount of effort involved.
If you found any issues please either email me, reply to this thread and/or
file a tracker item at the Physiome Tracker.
Regards,
Tommy.
- [cellml-discussion] Staging of Physiome Repository with git backend; PMR2 release10 testing, Tommy Yu, 02/27/2015
- Re: [cellml-discussion] Staging of Physiome Repository with git backend; PMR2 release10 testing, Peter Hunter, 02/27/2015
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