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[cellml-dev] CellML 1.3


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  • From: ak.miller at auckland.ac.nz (Andrew Miller)
  • Subject: [cellml-dev] CellML 1.3
  • Date: Thu, 10 Jan 2008 12:34:01 +1300

Jane Ren wrote:
> Andrew,
>
> I just downloaded CellML_DOM_API_1.3.tar.bz2 from the CellML website, and
> I noticed that there is no configure script in that tar ball. So I run
> "autoconf", but got a bunch of errors.
>
> configure.ac:4: error: possibly undefined macro: AM_CXXFLAGS
> If this token and others are legitimate, please use m4_pattern_allow.
> See the Autoconf documentation.
> configure.ac:12: error: possibly undefined macro: AM_INIT_AUTOMAKE
> configure.ac:22: error: possibly undefined macro: AM_CONDITIONAL
> configure.ac:225: error: possibly undefined macro: AC_LIBTOOL_DLOPEN
> ....
>
Hi Jane,

I'm sorry about this issue, we are aware of it (see tracker item
https://tracker.physiomeproject.org/show_bug.cgi?id=254). The result of
the discussion on the tracker item is that future versions of the CellML
API will have configure run on them prior to being packed up as a
tarball. I don't like the idea of changing a released file post-release,
so unfortunately the official 1.3 download for this cannot be fixed
until the next release.

I think the problem may be that you are not running aclocal first (the
order is usually aclocal, then autoconf, then automake).

I downloaded the official release, and did this:
aclocal && autoconf && automake

I have aclocal-1.9, autoconf2.50, and automake-1.9. automake-1.10 has
also been known to work (with a slightly later autoconf).

I got a few non-fatal warnings, mostly just due to the way my system was
set up:
/home/amil082/usr/share/aclocal-1.9/sigc++.m4:8: warning: underquoted
definition of AM_PATH_SIGC
run info '(automake)Extending aclocal'
or see http://sources.redhat.com/automake/automake.html#Extending-aclocal
/home/amil082/usr/share/aclocal-1.9/nspr.m4:8: warning: underquoted
definition of AM_PATH_NSPR
/home/amil082/usr/share/aclocal-1.9/cppunit.m4:4: warning: underquoted
definition of AM_PATH_CPPUNIT
/home/amil082/usr/share/aclocal/sigc++.m4:8: warning: underquoted
definition of AM_PATH_SIGC
/home/amil082/usr/share/aclocal/nspr.m4:8: warning: underquoted
definition of AM_PATH_NSPR
/home/amil082/usr/share/aclocal/cppunit.m4:4: warning: underquoted
definition of AM_PATH_CPPUNIT
aclocal: warning: macro `AM_DISABLE_FAST_INSTALL' defined in
acinclude.m4 but never used

However, I get a configure script after this. I could send you the
configure script, but I think that you would then run into problems
because you don't have the Makefile.in files, as well as libtool files
generated in a compatible way, so I think it is probably best you try
the above series of commands with automake 1.9 or 1.10. If you can't get
it to work after that I could tar up everything with the configure
scripts and generated Makefile.in outputs and send that to you.

Best regards,
Andrew

> I ran automake as well, and got a bunch of errors too. Could you possibly
> send me the configure script?
>
> Thank you
> Jane
>
>
>




  • [cellml-dev] CellML 1.3, Andrew Miller, 01/10/2008

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