- From: david.nickerson at nus.edu.sg (David Nickerson)
- Subject: [cellml-discussion] Should groups be allowed to imply metadatainformation?
- Date: Wed, 12 Dec 2007 10:45:16 +0800
Andrew Miller wrote:
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Hi all,
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The CellML 1.1 specification says:
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"
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6.5.3 Groups must not imply metadata information
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Modellers must not use CellML groups to associate properties or
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classification information with sets of components. The metadata
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functionality is the proper method for making such associations. This
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increases the chance of that information being used by a range of CellML
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processing software.
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"
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If extension groups cannot be used to imply metadata or mathematical
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information, then there is not really anything left for them to imply. I
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think that we should do one of the following:
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1) Non-standard relationship types be disallowed, and only encapsulation
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and containment be kept (encapsulation does affect the mathematical
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formulation of the model, while containment is really metadata
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information), or perhaps only encapsulation should be kept, with
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containment data represented in metadata, or,
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2) Allow groups to be used for metadata information, but in the
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informatively annotated specification encourage the CellML community to
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standardise on exactly how a certain type of metadata should be
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represented (this is required whether RDF/XML or groups is used to
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express the metadata anyway).
I'd be in favour of option 1 combined with moving containment into metadata.
Just to add a link to the tracker, also see:
https://tracker.physiomeproject.org/show_bug.cgi?id=316
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