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Re: [[cellml-dev] ] DENIS@home project


Chronological Thread 
  • From: Jesús Carro Fernández <jcarro AT usj.es>
  • To: cellml-tools-developers AT lists.cellml.org
  • Cc: Joel Castro Mur <jcastro AT usj.es>
  • Subject: Re: [[cellml-dev] ] DENIS@home project
  • Date: Wed, 29 Jul 2015 14:44:09 +0200
  • Authentication-results: mx3.auckland.ac.nz; dkim=neutral (message not signed) header.i=none
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    Thank you David!<br />
    <br />
    <div>On 29/07/15 06:04, David Nickerson
      wrote:<br />
    </div>
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      <pre>Hi Jesús,

Thanks for the email, this sounds like quite an interesting approach -
and, of course, great that you are using CellML for this :)

I&#39;ll forward this email to the cellml-discussion list as I believe
that it is of general interest to the community and also to a few
others that I know might be interested in electrophysiology
simulations.


Cheers,
David.


On Thu, Jul 23, 2015 at 12:22 AM, Jesús Carro Fernández <a href="mailto:jcarro AT usj.es">&lt;jcarro AT usj.es&gt;</a> wrote:
</pre>
      <blockquote>
        <pre>I&#39;m writing in this list to share with you a new CellML-based project we
have started a few months ago: DENIS (Distributed computing,
Electrophysiological models, Networking collaboration, In silico research,
Sharing knowledge).

The idea of the project is to create a network of volunteers which will
simulate a lot of variations of a CellML model. Using CellML files, the
CellML API and the BOINC API, we are able to create a program that solves
the CellML model in a BOINC project. Each volunteer receives the program and
a configuration file which indicates: the model to simulate, the model
constants to modify and the model variables to save. Until now, the solver
is very simple but we want to improve it to permit to simulate fibers,
tissues, etc.

The volunteer computing permits us to create a grid with a very high average
floating point operations per second with a very low cost. Our idea is to
open it to any researcher who needs computational capacity through a web
interface. While we reach this goal, if any one wants to use the network,
please, fell free to contact us. We can do it in a more &quot;hand-made&quot; way. We
are open to sugestions, comments or ideas that could improve the project.

Finally, if you could share the project to get more volunteers, we will be
very thankful. You can find more information on <a href="http://denis.usj.es";>http://denis.usj.es</a> and more
statistics of the network on
<a href="http://boincstats.com/en/stats/160/project/detail/overview";>http://boincstats.com/en/stats/160/project/detail/overview</a>

Syncerelly,

Jesús Carro Fernández
San Jorge University
</pre>
      </blockquote>
      <pre>


</pre>
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      <p><!--filtered--> <strong>Jesús Carro
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