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[cellml-discussion] CellML2Dot


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  • From: j.lawson at auckland.ac.nz (James Lawson)
  • Subject: [cellml-discussion] CellML2Dot
  • Date: Thu, 28 Jun 2007 13:36:10 +1200
Okay, Andrew helped me sort the subversion issue out, it was hitting the
firewall.

Perhaps if I can figure out how to install it then we might be able to
help other Linux novice types.

I ran cmake -i (wizard mode) and it gave the following output:

"jlaw060 at bioeng78:~/usr/CellML2Dot$ cmake -i
Would you like to see advanced options? [No]:no
Please wait while cmake processes CMakeLists.txt files....

CMake Error: Error in cmake code at
/people/jlaw060/usr/CellML2Dot/FindCellML.cmake:67:
MESSAGE Could not find CellML
Current CMake stack:
/people/jlaw060/usr/CellML2Dot/CMakeLists.txt;/usr/share/CMake/Modules/CMakeCInformation.cmake;/usr/share/CMake/Modules/CMakeCXXInformation.cmake;/people/jlaw060/usr/CellML2Dot/FindCellML.cmake


Variable Name: CELLML_INCLUDE_DIR
Description: Path to a file.
Current Value: CELLML_INCLUDE_DIR-NOTFOUND
New Value (Enter to keep current value):

Variable Name: CELLML_LIBRARY
Description: Path to a library.
Current Value: CELLML_LIBRARY-NOTFOUND
New Value (Enter to keep current value):

Variable Name: CMAKE_BACKWARDS_COMPATIBILITY
Description: For backwards compatibility, what version of CMake commands
and syntax should this version of CMake allow.
Current Value: 2.4
New Value (Enter to keep current value):

Variable Name: CMAKE_BUILD_TYPE
Description: Choose the type of build, options are: None(CMAKE_CXX_FLAGS
or CMAKE_C_FLAGS used) Debug Release RelWithDebInfo MinSizeRel.
Current Value:
New Value (Enter to keep current value):

Variable Name: CMAKE_INSTALL_PREFIX
Description: Install path prefix, prepended onto install directories.
Current Value: /usr/local
New Value (Enter to keep current value):

Variable Name: EXECUTABLE_OUTPUT_PATH
Description: Single output directory for building all executables.
Current Value:
New Value (Enter to keep current value):

Variable Name: LIBRARY_OUTPUT_PATH
Description: Single output directory for building all libraries.
Current Value:
New Value (Enter to keep current value):

Please wait while cmake processes CMakeLists.txt files....
"

David Nickerson wrote:
> Hi James,
>
> James Lawson wrote:
>> Hi Andre,
>>
>> In the workshop you showed us a slide of a program you'd made for
>> debugging models that showed all the connections etc. Is this that
>> program? I tried to get the source off subversion but it didn't work. Do
>> you have any tips on getting this tool to work?
>
> do you mean that you were unable to get the source out of the
> SourceForge subversion server or that you were unable to build it? I
> just checked the command on the cellml.sourceforge.net page (svn
> checkout
> https://cellml.svn.sourceforge.net/svnroot/cellml/CellML2Dot/trunk
> CellML2Dot) and it worked fine for me.
>
> If its building thats causing grief, then its probably one of the many
> dependencies that is missing. Hopefully the cmake process will tell you
> what it can't find, otherwise I really need to get around to writing
> some documentation....
>
> oh, and yes, that is that program :)
>
>
> Andre.
> _______________________________________________
> cellml-discussion mailing list
> cellml-discussion at cellml.org
> http://www.cellml.org/mailman/listinfo/cellml-discussion



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