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Hi Andrew,

Sounds like a good idea, although I would like to see the 'using
ordinary differential equations' bit dropped.

It would also be good to try and work this definition into the front
page at cellml.org - that is the most common place I look when I need a
brief blurb on CellML. Might possibly fit in with a new section on the
website on "How to cite CellML" ??


Andre.


Andrew Miller wrote:
> Hi,
>
> I have noticed that a lot of people who refer to CellML (generally
> people who don't use CellML, but reference it) feel obliged to expand
> the abbreviation, and they generally expand it as "Cell Markup Language".
>
> As far as I am aware, we have never actually said that CellML stands for
> Cell Markup Language, and indeed, that expansion doesn't really make
> sense, because CellML does not aim to mark up cells at all, and it is in
> some sense independent of biology at a technical level. However, unless
> we can agree as a community that CellML doesn't stand for "Cell Markup
> Language", there is a risk that people will keep calling it that, which
> could result in a misunderstanding of what CellML is.
>
> I suggest that we put the following note up as an errata to the CellML
> specifications (please indicate whether you agree with the intention of
> this, and whether you agree with the specific wording):
>
> "CellML is not intended to be an abbreviation, but rather, it is simply
> a name used to identify the language. The fact that CellML starts with
> the word 'Cell' is a result of its original intended use. However,
> CellML is actually a generic mathematical modelling language which can
> be applied in a range of disciplines. It is worth noting that CellML
> does not stand for 'Cell Markup Language'. Instead, when introducing
> CellML to an audience who may be unfamiliar with it, a short explanation
> of CellML is recommended. For example, 'CellML (a mathematical model
> markup language most commonly used to describe biological systems using
> ordinary differential equations)' ".
>
> Best regards,
> Andrew
>
> _______________________________________________
> cellml-discussion mailing list
> cellml-discussion at cellml.org
> http://www.cellml.org/mailman/listinfo/cellml-discussion

--
David Nickerson, PhD
Research Fellow
Division of Bioengineering
Faculty of Engineering
National University of Singapore
Email: david.nickerson at nus.edu.sg

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• [cellml-discussion] Expanding the CellML abbreviation, Andrew Miller, 07/03/2007
  • [cellml-discussion] Expanding the CellML abbreviation, David Nickerson, 07/03/2007
    • [cellml-discussion] Expanding the CellML abbreviation, Andrew Miller, 07/03/2007
      • [cellml-discussion] Expanding the CellML abbreviation, David Nickerson, 07/03/2007
      • [cellml-discussion] Expanding the CellML abbreviation, James Lawson, 07/03/2007
    • [cellml-discussion] Expanding the CellML abbreviation, James Lawson, 07/03/2007
      • [cellml-discussion] Expanding the CellML abbreviation, David Nickerson, 07/03/2007
      • [cellml-discussion] PDEs in CellML was Re: Expanding the CellML abbreviation, Andrew Miller, 07/03/2007
  • [cellml-discussion] Expanding the CellML abbreviation, David Brooks, 07/03/2007

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