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[cellml-discussion] embedded stimulus currents in CellML models


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  • From: alan.garny at dpag.ox.ac.uk (Alan Garny)
  • Subject: [cellml-discussion] embedded stimulus currents in CellML models
  • Date: Thu, 19 Jul 2007 10:56:45 +0100

> > > It would definitely be cool to get some basic documentation for
> these
> > > tools. If you have a go at installing CellML2Dot in Linux Alan, let
> > me
> > > know. I'd like to see Andre's simulator too. How does it differ
> from
> > > PCEnv or COR Andre?
> >
> > its quite different in that it has no GUI at all - it is a command
> line
> > only application that simply processes my analysis metadata, cellml
> > graphing metadata, and cellml simulation metadata to determine what
> > simulations need to be run to produce the data required for the
> defined
> > graphs and any analysis the user wants to perform. It uses the CellML
> > API and CCGS to generate C code from CellML 1.1 models.
> >
> > There is no restriction to linux, as all the libraries I use are
> > available on a whole bunch of platforms (I think?), including Windows
> > and Macs...not that I have tried to build the tools under anything
> > other
> > than Linux :-)
>
> Yes, it would be good to have some information for Windows and Mac...
> and in fact for Linux too... :)
>
> Still, I have managed to recompile it.

Oops, this got sent too early and I have yet to get CellML2Dot to compile...
In fact, I have given up and I think it does illustrate the point I made in
a previous message of mine: documentation, documentation, documentation...
:)

Alan.





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