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[cellml-discussion] PMR categories


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  • From: matt.halstead at auckland.ac.nz (Matt )
  • Subject: [cellml-discussion] PMR categories
  • Date: Fri, 8 Jun 2007 14:00:29 +1200
On 6/8/07, James Lawson <j.lawson at auckland.ac.nz> wrote:
> So for example someone's trying to build a large model but the only
> components (or data to build components) available are from non-matching
> species?

Yes.

> So the LFID (I looked it up but it went over my head) provides
> a way we can do that which is more precise and flexible than simply
> referring to NCBI taxonomy?

Read the paper I referenced, it has a very simple breakdown of LSID
and the taxonomy naming issue.

>
> >
> > The critical thing for us is that a single model will quite often
> > contain elements that derive their mechanism or parameters from
> > studies on different organisms, so we need to be quite rigorous in
> > looking at all components in a model and identifying their origin.
> > This is obviously one facet where imports should be helping us to put
> > circles around species specific submodels.
>
>
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