Chronological Thread 

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Matt wrote:
> This scratches a couple of important pending issues:
>
> 1) I feel the term 'variant' is odd (even though I originally
> suggested it). It was intended to mean that the model labelled as a
> variant is a variation of the one it is a variant of. However, this
> isn't really a very applicable definition, especially if one may
> consider a model to be a variant of more than one other model. Since
> variant is bound up in the URI and name then this makes for dilemmas.
> My suggestion would be that we drop variants altogether. We can mark
> relations in a better way through metadata.
>
> I am also querying whether the flatness of our URI scheme is
> appropriate for our uses.
>
> e.g. perhaps:
>
> http://www.cellml.org/models/bondarenko_szigeti_bett_kim_rasmusson_2004_version01
>
> should be something like
>
> http://www.cellml.org/models/bondarenko_szigeti_bett_kim_rasmusson/2004/ventricular?rev=1
>
> (no that is not a formal proposal)
>
> But this doesn't really help you now. The technically correct method
> at the moment would be that the new models that are similar but
> different only in their parameterisations are added as variants.
>

Right.

> Another alternative in the short term would to simply name the models
> as separate models (which they are)

That's an interesting proposal. Given the current way that the models
are listed, that would be a good way of displaying that the models are
variants. If you upload two variants of a model, they come up as
duplicate listings (i.e. no information is displayed about the nature of
the variant,) so simply making them two different models would get
around this. Anyone else have comments on this?

and we define now an rdf relation
> scheme that is very explicitly about how different models at different
> URIs relate to the one you are editing. This would mean that Tommy
> needs to update the rendering of the pages for these models to reflect
> this information.
>
> 2) These models should use imports so that we can at least point to
> the generic model and then the specialised parameterised ones. But
> that won't work right now because the repository can't handle 1.1
> models.

In this case there is no generic model available. The model we have on
the repository for Bondarenko et al. 2004 is the one describing the
apical cells.

>
> cheers
> Matt
>

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• [cellml-discussion] Workshop presentations now available, David Nickerson, 04/11/2007
  • [cellml-discussion] model variants(?): e.g. where multiple cell types are described by the same model in different files, James Lawson, 04/12/2007
    • [cellml-discussion] model variants(?): e.g. where multiple cell types are described by the same model in different files, James Lawson, 04/12/2007
      • [cellml-discussion] model variants(?): e.g. where multiple cell types are described by the same model in different files, Matt , 04/12/2007
        • [cellml-discussion] model variants(?): e.g. where multiple cell types are described by the same model in different files, Tommy Yu, 04/12/2007
          • [cellml-discussion] model variants(?): e.g. where multiple celltypes are described by the same model in different files, David Nickerson, 04/12/2007
            • [cellml-discussion] model variants(?): e.g. where multiple celltypes are described by the same model in different files, Matt , 04/12/2007
              • [cellml-discussion] model variants(?): e.g. where multiplecelltypes are described by the same model in different files, David Nickerson, 04/12/2007
        • [cellml-discussion] model variants(?): e.g. where multiple cell types are described by the same model in different files, James Lawson, 04/12/2007
          • [cellml-discussion] model variants(?): e.g. where multiple celltypes are described by the same model in different files, David Nickerson, 04/12/2007
            • [cellml-discussion] curation annotation framework, James Lawson, 04/12/2007
              • [cellml-discussion] curation annotation framework, David Nickerson, 04/12/2007
              • [cellml-discussion] curation annotation framework, James Lawson, 04/12/2007
              • [cellml-discussion] curation annotation framework, Matt , 04/12/2007
              • [cellml-discussion] curation annotation framework, David Nickerson, 04/12/2007
              • [cellml-discussion] curation annotation framework, David Nickerson, 04/12/2007
          • [cellml-discussion] model variants(?): e.g. where multiple cell types are described by the same model in different files, Matt , 04/12/2007
      • [cellml-discussion] model variants(?): e.g. where multiple celltypes are described by the same model in different files, David Nickerson, 04/12/2007

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